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protocols
3C (Chromosome Conformation Capture)
Mapping Chromatin Interactions by Chromosome Conformation Capture

Adriana Miele 1, Nele Gheldof 1, Tomoko M. Tabuchi 1, Josee Dostie 1, Job Dekker 1

1 University of Massachusetts Medical School, Worcester, Massachusetts

* To whom correspondence should be addressed. E-mail: Job Dekker
Mapping cis- and trans-chromatin interaction networks using Chromosome Conformation Capture (3C)

Miele A, Dekker J.

Program in Gene Function and Expression and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA.
5C (Chromosome Conformation Capture Carbon Copy)
Mapping networks of physical interactions between genomic elements using 5C technology

Josee Dostie 1 & Job Dekker 1

1 Program in Gene Function and Expression and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605-0103, USA;


Correspondence to: Job Dekker
Chromosome Conformation Capture Carbon Copy Technology

Josee Dostie 1,2, Ye Zhan 2, Job Dekker 2

1 McGill University, Montréal, Québec, Canada, Canada
2 University of Massachusetts Medical School, Worcester, Massachusetts


Correspondence to: Job Dekker
Determining spatial chromatin organization of large genomic regions using 5C technology

van Berkum NL, Dekker J.

Program in Gene Function and Expression and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA
Hi-C
Hi-C: A Method to Study the Three-dimensional Architecture of Genomes

Nynke L. van Berkum1,*, Erez Lieberman-Aiden2, 3, 4, 5,*, Louise Williams2,*, Maxim Imakaev6, Andreas Gnirke2, Leonid A. Mirny3, 6, Job Dekker1, Eric S. Lander2, 7, 8

1Program in Gene Function and Expression, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 2Broad Institute of Harvard and Massachusetts Institute of Technology, 3Division of Health Sciences and Technology, Massachusetts Institute of Technology, 4Program for Evolutionary Dynamics, Department of Organismic and Evolutionary Biology, Department of Mathematics, Harvard University, 5Department of Applied Mathematics, Harvard University, 6Department of Physics, Massachusetts Institute of Technology, 7Department of Biology, Massachusetts Institute of Technology, 8Department of Systems Biology, Harvard Medical School

* These authors contributed equally